I posted this topic here about a month ago with similar thoughts, specifically in the context of newer mirrorless bodies. After being a long-time BBAF guy from my DSLR days, I started experimenting & testing scenarios between BBAF and shutter release AF configs. I quickly realized my thumb really was doing unnecessary work - and it could be free'd up for other functions assigned to AF-ON or the sub-selector button (AE-Lock, Spot Metering, Zoom, etc.). Or, to simply hold / support the camera much easier / more securely when shooting one-handed (I frequently hold a reflector, light, or shoot low to the ground - all of which require one-handed control). Shooting one-handed and working AF-ON and the shutter is not ideal.
Other than muscle-memory (which is valid), I really haven't heard a compelling enough reason to use BBAF with mirrorless AF systems. At least for what I do. I'm getting shots with less effort, more stability, more shooting options with my free thumb, and the same keeper rate as always.